CDS

Accession Number TCMCG051C05746
gbkey CDS
Protein Id XP_024449900.1
Location complement(join(49375217..49375676,49375774..49375844,49375976..49376068))
Gene LOC7490753
GeneID 7490753
Organism Populus trichocarpa

Protein

Length 207aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024594132.1
Definition cold shock protein 1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA binding
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
ko:K17491        [VIEW IN KEGG]
ko:K18754        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko04212        [VIEW IN KEGG]
ko04922        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map04212        [VIEW IN KEGG]
map04922        [VIEW IN KEGG]
GOs GO:0001708        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007549        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010453        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031054        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042659        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045165        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060147        [VIEW IN EMBL-EBI]
GO:0060149        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060964        [VIEW IN EMBL-EBI]
GO:0060965        [VIEW IN EMBL-EBI]
GO:0060966        [VIEW IN EMBL-EBI]
GO:0060967        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0060969        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070878        [VIEW IN EMBL-EBI]
GO:0070883        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0070920        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1903798        [VIEW IN EMBL-EBI]
GO:1903799        [VIEW IN EMBL-EBI]
GO:1990715        [VIEW IN EMBL-EBI]
GO:2000634        [VIEW IN EMBL-EBI]
GO:2000635        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTTTCGGGGAAAAATGTAGCTGAGCGTGATTTGGAAGATTTCAACGAAAGCATGCATGATGCTGCTGCTGATGAAGCTGCAACTGAATTGAACAGGATGAGCAGACCAGTAAGCCTGGGATATGCTACTGAAAGAGTTTCTGCTCCTATGGAAAGTGACAAGATTCGTTATGCACAGCCACAACATAGGCGACAGACTGGAAGTGTGAAATGGTTTTCTAGTCAAAGGGGCTATGGCCTTACAGCACCAAGTGATGGAAGCAAAAATGTATTTGTTCATTATTCATCTCTTAAATCAGATGGCCGCCTACATCTGCAGCCTAACACTTCCATCGAGGACGAAATCCTCAGGGGCTCTGAAGGAAAAACAGAAGCCATTAATGCCACAGCTCCTGGTGGAAGATTGCTTCCAAACAGCAGAAAACTTGGTCCTGGAGAGAACATCACTGGAAGCAGCAGCAGCAAATCCATGAGTTCCCGTAACTCCAATACTAGCAGTTTCAATAATGTTGGACCTTGTTTTATCTGTGGCCAGTTGGGGCACTTGGCGAAGAATCATCTCCTCAACCAAATATATTTTTGTCCTTTTTACATCTGTTTCCACTATCCTCGACACTAA
Protein:  
MSFSGKNVAERDLEDFNESMHDAAADEAATELNRMSRPVSLGYATERVSAPMESDKIRYAQPQHRRQTGSVKWFSSQRGYGLTAPSDGSKNVFVHYSSLKSDGRLHLQPNTSIEDEILRGSEGKTEAINATAPGGRLLPNSRKLGPGENITGSSSSKSMSSRNSNTSSFNNVGPCFICGQLGHLAKNHLLNQIYFCPFYICFHYPRH